lmc_control


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About

Editors:
User Mugshot tle1302 
Contact email:
Image Version:
7ce3c202-01ac-46d7-8fd4-4878e8e3a187 — April 19, 2024

Summary

github repo TBD

Mechanism

TBD


Interfaces

This algorithm implements all of the following input-output combinations:

Inputs Outputs
1
    Organelles Transmitted-Light OME-TIFF
    Nucleus Fluorescence OME-TIFF
    Mitochondria Fluorescence OME-TIFF
    Actin Fluorescence OME-TIFF
    Tubulin Fluorescence OME-TIFF

Validation and Performance

nucleus.SSIM (Position) nucleus.MAE (Position) nucleus.PCC (Position) nucleus.E_dist (Position) nucleus.C_dist (Position)
test set 0.7624 (1) 0.0612 (1) 0.7438 (4) 164.8783 (1) 0.1769 (4)

Challenge Performance

Date Challenge Phase Rank
April 12, 2024 lightmycells Phase 1 11
April 19, 2024 lightmycells Phase 2 1

Uses and Directions

This algorithm was developed for research purposes only.

Warnings

The model is not generalized enough yet, it will predict fuzzy output with some input data type.

Common Error Messages

Information on this algorithm has been provided by the Algorithm Editors, following the Model Facts labels guidelines from Sendak, M.P., Gao, M., Brajer, N. et al. Presenting machine learning model information to clinical end users with model facts labels. npj Digit. Med. 3, 41 (2020). 10.1038/s41746-020-0253-3