lmc_control


Logo for lmc_control

About

Creator:

User Mugshot tle1302 

Contact email:
Image Version:
7ce3c202-01ac-46d7-8fd4-4878e8e3a187
Last updated:
April 19, 2024, 4:22 p.m.

Interfaces

This algorithm implements all of the following input-output combinations:

Inputs Outputs
1
  • Organelles Transmitted-Light OME-TIFF (Image)
  • Nucleus Fluorescence OME-TIFF (Image)
  • Mitochondria Fluorescence OME-TIFF (Image)
  • Actin Fluorescence OME-TIFF (Image)
  • Tubulin Fluorescence OME-TIFF (Image)
  • Challenge Performance

    Date Challenge Phase Rank
    April 12, 2024 lightmycells Phase 1 11
    April 19, 2024 lightmycells Phase 2 1

    Model Facts

    Summary

    github repo TBD

    Mechanism

    TBD

    Validation and Performance

    nucleus.SSIM (Position) nucleus.MAE (Position) nucleus.PCC (Position) nucleus.E_dist (Position) nucleus.C_dist (Position)
    test set 0.7624 (1) 0.0612 (1) 0.7438 (4) 164.8783 (1) 0.1769 (4)

    Uses and Directions

    This algorithm was developed for research purposes only.

    Warnings

    The model is not generalized enough yet, it will predict fuzzy output with some input data type.

    Common Error Messages

    Information on this algorithm has been provided by the Algorithm Editors, following the Model Facts labels guidelines from Sendak, M.P., Gao, M., Brajer, N. et al. Presenting machine learning model information to clinical end users with model facts labels. npj Digit. Med. 3, 41 (2020). 10.1038/s41746-020-0253-3