NSD thresholds

NSD thresholds  

  By: Koitka on June 7, 2022, 2:35 p.m.

Hello, I have found the implementation of the evaluation metrics for binary masks at http://medicaldecathlon.com/files/Surface_distance_based_measures.ipynb However, I cannot find the thresholds used during evaluation for each individual label. Could you please clarify which thresholds are used, so that we can run local evaluations (e.g. during cross-validation)?

Re: NSD thresholds  

  By: jyuanfeng8 on June 8, 2022, 12:09 a.m.

HI, we use tolerance_mm = 1 for all organs.

Re: NSD thresholds  

  By: Koitka on June 8, 2022, 6:45 a.m.

Thanks