submission errors (Xulin Chen (大胖胖墩), Ye Zhang (pluto_charon)

submission errors (Xulin Chen (大胖胖墩), Ye Zhang (pluto_charon)  

  By: crunch on April 5, 2022, 12:40 p.m.

Hi, we noticed that the last submission by visilab failed (model file was missing) - please contact us for more details or if you need more help (applies to all participants with or without failed submissions :-) ).

Update2: vunos submission failed due to (still the same error): ModuleNotFoundError: No module named 'vuno.detection..modeling'

Update3 @sleepygray: File til-score.json was not produced (needs to be created even if not used for L1 evaluation)

Update4@sleepygray: The container was killed as it exceeded the memory limit of 16g

Update5@vuno: "RuntimeError: Found no NVIDIA driver on your system" This is strange, usually this would indicate something wrong with the (aws) node, but also maybe something is wrong with the installed cuda version in your docker?

Update6@大胖胖墩 The file produced at detected-lymphocytes.json is not valid - please see the example on submission details webpage.

Update 8th April: @gdph: ValueError: images do not match segmentation_mask.paste(mask,(x,y,x+seg_size_x,y+seg_size_y)) File "/venv/lib/python3.8/site-packages/PIL/Image.py", line 1584, in paste self.im.paste(im, box)

@大胖胖墩. The lymphocytes are still invalid, I assume because the coords are still numpy and saved with <> in the json. x: 8.39248150281592 x float: 8.39248150281592

Update 22nd April: please be aware that the docker will not have internet access, so trying to download models, etc. will either result in an error or a hanging job terminated after the time limit ends.

Best, Witali

 Last edited by: crunch on Aug. 15, 2023, 12:56 p.m., edited 12 times in total.

Re: submission errors (visilab, vuno)  

  By: sungdukcho_vuno on April 6, 2022, 1:29 a.m.

Thank you for sharing the error message! We will look for the following error. :)

Yours sincerely, Sungduk Cho

Re: submission errors (visilab, vuno, sleepygray)  

  By: SleepyGray on April 6, 2022, 12:37 p.m.

Thanks for pointing the reason why my submission failed. :D

 Last edited by: SleepyGray on Aug. 15, 2023, 12:56 p.m., edited 1 time in total.

Re: submission errors  

  By: mart.vanrijthoven on April 12, 2022, 3:33 p.m.

Dear Ye Zhang (pluto_charon),

Your submission failed due to a time limit. You are not using a GPU, please check you dockerfile. You might want to build from nvidia-docker. E.g., change FROM ubuntu:20.04 -> FROM nvidia/cuda:11.1-runtime-ubuntu20.04

Re: submission errors  

  By: mart.vanrijthoven on April 12, 2022, 3:37 p.m.

Dear Xulin Chen,

Your submission failed, The file produced at detected-lymphocytes.json is not valid. Maybe you are using the numpy representations in the json file? If so please convert them to regular floats. Please let me know if anything is unclear.

Best wishes, Mart