ANHIR

The challenge focuses on comparing the accuracy (using manually annotated landmarks) and the approximate speed of automatic non-linear registration methods for aligning microscopy images of multi-stained histology tissue samples.

Learn2Reg

Challenge on medical image registration addressing: learning from small datasets; estimating large deformations; dealing with multi-modal scans; and learning from noisy annotations

COVID-19 LUNG CT LESION SEGMENTATION CHALLENGE - 2020

This challenge will create the platform to evaluate emerging methods for the segmentation and quantification of lung lesions caused by SARS-CoV-2 infection from CT images.

AutoImplant 2021

Second MICCAI Challenge on Automatic Cranial Implant Design (AutoImplant 2021)

Parse2022

It is of significant clinical interest to study pulmonary artery structures in the field of medical image analysis. One prerequisite step is to segment pulmonary artery structures from CT with high accuracy and low time-consuming. The segmentation of pulmonary artery structures benefits the quantification of its morphological changes for diagnosis of pulmonary hypertension and thoracic surgery. However, due to the complexity of pulmonary artery topology, automated segmentation of pulmonary artery topology is a challenging task. Besides, the open accessible large-scale CT data with well labeled pulmonary artery are scarce (The large variations of the topological structures from different patients make the annotation an extremely challenging process). The lack of well labeled pulmonary artery hinders the development of automatic pulmonary artery segmentation algorithm. Hence, we try to host the first Pulmonary ARtery SEgmentation challenge in MICCAI 2022 (Named Parse2022) to start a new research topic.

SynthRAD2023

SynthRAD is the first challenge on automatic generation of synthetic computed tomography (sCT) for radiotherapy

3D Teeth Scan Segmentation and Labeling Challenge MICCAI2022

Computer-aided design (CAD) tools have become increasingly popular in modern dentistry for highly accurate treatment planning. In particular, in orthodontic CAD systems, advanced intraoral scanners (IOSs) are now widely used as they provide precise digital surface models of the dentition. Such models can dramatically help dentists simulate teeth extraction, move, deletion, and rearrangement and therefore ease the prediction of treatment outcomes. Although IOSs are becoming widespread in clinical dental practice, there are only few contributions on teeth segmentation/labeling available in the literature and no publicly available database. A fundamental issue that appears with IOS data is the ability to reliably segment and identify teeth in scanned observations. Teeth segmentation and labelling is difficult as a result of the inherent similarities between teeth shapes as well as their ambiguous positions on jaws.

ACROBAT 2023

The ACROBAT challenge aims to advance the development of WSI registration algorithms that can align WSIs of IHC-stained breast cancer tissue sections to corresponding tissue regions that were stained with H&E. All WSIs originate from routine diagnostic workflows.

The Head and Neck Organ-at-Risk CT & MR Segmentation Challenge

A semantic multimodal segmentation challenge comprising 30 organs at risk

Robust Non-rigid Registration Challenge for Expansion Microscopy

autoPET-II

Automated Lesion Segmentation in PET/CT - Domain Generalization

ToothFairy: Cone-Beam Computed Tomography Segmentation Challenge

This is the first edition of the ToothFairy challenge organized by the University of Modena and Reggio Emilia with the collaboration of Raudboud University. This challenge aims at pushing the development of deep learning frameworks to segment the Inferior Alveolar Canal (IAC) by incrementally extending the amount of publicly available 3D-annotated Cone Beam Computed Tomography (CBCT) scans. CBCT modality is becoming increasingly important for treatment planning and diagnosis in implant dentistry and maxillofacial surgery. The three-dimensional information acquired with CBCT can be crucial to plan a vast number of surgical interventions with the aim of preserving noble anatomical structures such as the Inferior Alveolar Canal (IAC), which contains the homonymous nerve (Inferior Alveolar Nerve, IAN). Deep learning models can support medical personnel in surgical planning procedures by providing a voxel-level segmentation of the IAN automatically extracted from CBCT scans.

ARCADE-MICCAI2023

SEG.A. - Segmentation of the Aorta

Segmentation, modeling and visualization of the arterial tree are still a challenge in medical image analysis. The main track of this challenge deals with the fully automatic segmentation of the aortic vessel tree in computed tomography images. Optionally, teams can submit tailored solutions for meshing and visualization of the vessel tree.

Surgical Planning in Pediatric Neuroblastoma

Topology-Aware Anatomical Segmentation of the Circle of Willis

Segment the Circle of Willis (CoW) vessel components for both CTA and MRA

SegRap 2023

A segmentation challenge with 200 patients (two modalities of CT images, 45 OARs and 2 GTVs).

Hypoxic Ischemic Encephalopathy Lesion Segmentation Challenge

CHAIMELEON Open Challenges

A unique opportunity for scientists to advance cancer research with AI. The CHAIMELEON Open Challenges invites participants to collaborate to develop and train new AI-powered solutions driving innovation in cancer diagnosis and treatment.

Head and Neck Tumor Segmentation for MR-Guided Applications

This challenge focuses on developing algorithms to automatically segment head and neck cancer gross tumor volumes on multi-timepoint MRI

Light My Cells : Bright Field to Fluorescence Imaging Challenge

Join the Light My Cells France-Bioimaging challenge! Enhance biology and microscopy by contributing to the development of new image-to-image deep labelling methods. The task: predict the best-focused output images of several fluorescently labelled organelles from label-free transmitted light input images. Dive into the future of imaging with us! 🌐🔬 #LightMyCellsChallenge

The LEOPARD Challenge

ToothFairy2: Multi-Structure Segmentation in CBCT Volumes

This is the second edition of the ToothFairy challenge organized by the University of Modena and Reggio Emilia with the collaboration of Radboud University Medical Center. The challenge is hosted by grand-challenge and is part of MICCAI2024.

Multi-Class Segmentation of Aortic Branches and Zones in CTA

3D Segmentation of Aortic Branches and Zones on Computed Tomography Angiography (CTA)

SynthRAD2025

SynthRAD is the first challenge on automatic generation of synthetic computed tomography (sCT) for radiotherapy

2nd BONBID-HIE Challenge for HIE Outcome Prediction and Lesion S