By: ecemsogancioglu on Dec. 30, 2021, 11:01 a.m.
Hi,
The error is as follows: 2021-12-29T10:51:38+00:00 Could not load nodules.json using . 2021-12-29T10:53:34+00:00 Traceback (most recent call last): 2021-12-29T10:53:34+00:00 File "/usr/local/lib/python3.7/runpy.py", line 193, in _run_module_as_main 2021-12-29T10:53:34+00:00 "main", mod_spec) 2021-12-29T10:53:34+00:00 File "/usr/local/lib/python3.7/runpy.py", line 85, in _run_code 2021-12-29T10:53:34+00:00 exec(code, run_globals) 2021-12-29T10:53:34+00:00 File "/opt/algorithm/process.py", line 127, in 2021-12-29T10:53:34+00:00 Nodulegeneration().process() 2021-12-29T10:53:34+00:00 File "/home/algorithm/.local/lib/python3.7/site-packages/evalutils/evalutils.py", line 183, in process 2021-12-29T10:53:34+00:00 self.process_cases() 2021-12-29T10:53:34+00:00 File "/home/algorithm/.local/lib/python3.7/site-packages/evalutils/evalutils.py", line 191, in process_cases 2021-12-29T10:53:34+00:00 self._case_results.append(self.process_case(idx=idx, case=case)) 2021-12-29T10:53:34+00:00 File "/home/algorithm/.local/lib/python3.7/site-packages/evalutils/evalutils.py", line 273, in process_case 2021-12-29T10:53:34+00:00 segmented_nodules = self.predict(input_image=input_image) 2021-12-29T10:53:34+00:00 File "/opt/algorithm/process.py", line 124, in predict 2021-12-29T10:53:34+00:00 return SimpleITK.GetImageFromArray(nodule_images) 2021-12-29T10:53:34+00:00 File "/home/algorithm/.local/lib/python3.7/site-packages/SimpleITK/extra.py", line 298, in GetImageFromArray 2021-12-29T10:53:34+00:00 _SetImageFromArray(z.tobytes(), img) 2021-12-29T10:53:34+00:00 MemoryError
Can you increase the memory requirements of your algorithm when you upload your container to grand-challenge?
Best, Ecem
