Missing segmentation in set_1 : case_19_OAR_OpticChiasm.seg.nrrd

Missing segmentation in set_1 : case_19_OAR_OpticChiasm.seg.nrrd  

  By: tchaye59 on April 11, 2023, 6:42 a.m.

There is a missing segmentation in the dataset case_19_OAR_OpticChiasm.seg.nrrd. Where can we get it?

 Last edited by: tchaye59 on Aug. 15, 2023, 12:57 p.m., edited 1 time in total.

Re: Missing segmentation in set_1 : case_19_OAR_OpticChiasm.seg.nrrd  

  By: tholmes on April 11, 2023, 8:25 a.m.

The optic chiasm is not in the FOV of case 19. This is mentioned in "3 - DATA FORMAT AND USAGE NOTES" of the dataset paper and is also noted in the "OAR_data.csv" file.

 Last edited by: tholmes on Aug. 15, 2023, 12:57 p.m., edited 1 time in total.

Re: Missing segmentation in set_1 : case_19_OAR_OpticChiasm.seg.nrrd  

  By: gasperpodobnik on April 11, 2023, 12:42 p.m.

Hey, I just wanted to confirm that optic chiasm is indeed not in the field-of-view for case 19 and we thus do not provide a nrrd file for it. Thanks @tholmes for a quick and exact response :)

Re: Missing segmentation in set_1 : case_19_OAR_OpticChiasm.seg.nrrd  

  By: tchaye59 on April 12, 2023, 5:43 a.m.

Thanks for the clarification