Diagnostic Image Analysis Group

The Diagnostic Image Analysis Group is part of the Departments of Imaging, Pathology, Ophthalmology, and Radiation Oncology of Radboud University Medical Center. We develop computer algorithms to interpret and process medical images.

 Location
Netherlands
 Website
https://www.diagnijmegen.nl
 Editors

User Mugshot siemdejong 

User Mugshot dnschouten 

User Mugshot MiriamGroeneveld 

User Mugshot chrisvanrun 

User Mugshot amickan 

User Mugshot KhrystynaFaryna 

User Mugshot kiranvaidhya 

User Mugshot leslietessier01 

User Mugshot BramVanGinneken 

Activity Overview

RadboudCOVID Logo
RadboudCOVID
 Archive

Data from RadboudUMC from Covid-19 (suspected) subjects

LOLA11 Logo
LOLA11
 Archive

55 scans from the LOLA11 challenge

LUNA16 Logo
LUNA16
 Archive

888 CT scans from the LUNA16 challenge

CORADS Score Exam Logo
CORADS Score Exam
 Reader Study

Assign a CORADS score to 25 cases. You will receive the results of the test by e-mail.

CORADS Score Practice Logo
CORADS Score Practice
 Reader Study

Practice CORADS scoring with 50 cases. You get instant feedback after every case.

Project AIR - DEMO - Lung nodule detection X-ray Logo
Project AIR - DEMO - Lung nodule detection X-ray
 Reader Study

Demonstration reader study to explore what it means to be a reader for Project AIR

Adhesion cine-MRI tutorial Logo
Adhesion cine-MRI tutorial
 Reader Study

A short 4-case tutorial for adhesion detection on abdominal cine-MRI

Demo educational reader study Logo
Demo educational reader study
 Reader Study

Reader study for demo purposes

The PANORAMA Challenge - Reading Interface and Workflow Demo Logo
The PANORAMA Challenge - Reading Interface and Workflow Demo
 Reader Study

PANORAMA is an all-new grand challenge with +2000 of carefully curated abdominal CECT exams, and tools to upload, run and validate AI in a secure environment, using standardized consensus-based guidelines.

LOLA11 Logo
LOLA11
 Challenge

The goal of LOLA11 (LObe and Lung Analysis 2011) is to compare methods for (semi-)automatic segmentation of the lungs and lobes from chest computed tomography scans. Any team, whether from academia or industry, can join.

LUNA16 Logo
LUNA16
 Challenge

The LUNA16 challenge: automatic nodule detection on chest CT

EMPIRE10 Logo
EMPIRE10
 Challenge

Challenge for intra-subject registration of chest CT images.

PROSTATEx Logo
PROSTATEx
 Challenge

Classification of clinical significance of prostate lesions using multi-parametric MRI data

HC18 Logo
HC18
 Challenge

Automated measurement of fetal head circumference using 2D ultrasound images

NODE21 Logo
NODE21
 Challenge

NODE21: generate and detect nodules on chest radiographs

tiger Logo
TIGER
 Challenge

Grand challenge on automate assessment of tumor infiltrating lymphocytes in digital pathology slides of triple negative and Her2-positive breast cancers

PI-CAI Logo
The PI-CAI Challenge
 Challenge

Artificial Intelligence and Radiologists at Prostate Cancer Detection in MRI

AIROGS Logo
AIROGS
 Challenge

Artificial Intelligence for RObust Glaucoma Screening Challenge

pairboneage22 Logo
Project AIR - commercial AI for bone age prediction on hand XR
 Challenge

Head-to-head performance evaluation of commercially available AI products. This challenge shows the results for bone age prediction on hand radiographs on a multicenter dataset (seven centers) from the Netherlands.

pairlungnodulexr22 Logo
Project AIR - commercial AI for lung nodule detection on CXR
 Challenge

Head-to-head performance evaluation of commercially available AI products. This challenge shows the results for lung nodule detection on chest radiographs on a multicenter dataset (seven centers) from the Netherlands.

ULS23 Logo
Universal Lesion Segmentation Challenge '23
 Challenge

ACOUSLIC-AI Logo
Abdominal Circumference Operator-agnostic UltraSound measurement
 Challenge

LEOPARD Logo
The LEOPARD Challenge
 Challenge

MONKEY Logo
MONKEY challenge: Detection of inflammation in kidney biopsies
 Challenge

MONKEY (Machine-learning for Optimal detection of iNflammatory cells in KidnEY)

workshop2024 Logo
Challenge Hosting Masterclass
 Challenge

A hands-on workshop designed to provide participants with practical experience in setting up a challenge.

Lung cancer risk estimation on thorax CT scans - DSB2017 grt123 Logo
Lung cancer risk estimation on thorax CT scans - DSB2017 grt123
 Algorithm

Automatic lung cancer risk estimation from thoracic CT scans

Spleen Segmentation Logo
Spleen Segmentation
 Algorithm

Automatic spleen segmentation on thorax-abdomen CT scans.

Vertebra segmentation and labeling Logo
Vertebra segmentation and labeling
 Algorithm

Segmentation and labeling of the vertebrae in CT scans with arbitrary field of view.

Tumor Detection in Lymph Nodes Logo
Tumor Detection in Lymph Nodes
 Algorithm

CXR Cardiomegaly Detection Logo
CXR Cardiomegaly Detection
 Algorithm

Detect cardiomegaly on chest radiographs through the segmentation of the heart and lungs .

Gleason Grading of Prostate Biopsies Logo
Gleason Grading of Prostate Biopsies
 Algorithm

Automated Gleason grading of prostate biopsies following the Gleason Grade Group system.

Pulmonary Lobe Segmentation Logo
Pulmonary Lobe Segmentation
 Algorithm

Automatic segmentation of pulmonary lobes on CT scans for patients with COPD or COVID-19.

Scaphoid fracture detection Logo
Scaphoid fracture detection
 Algorithm

Automatic detection of scaphoid fractures on hand, wrist, and scaphoid x-rays.

CORADS-AI Logo
CORADS-AI
 Algorithm

Segments pulmonary lobes and lesions and computes the CORADS and CT Severity Score from a non-contrast CT scan.

Pulmonary Nodule Malignancy Prediction Logo
Pulmonary Nodule Malignancy Prediction
 Algorithm

Deep Learning for Malignancy Risk Estimation of Low-Dose Screening CT Detected Pulmonary Nodules

HookNet-Breast Logo
HookNet-Breast
 Algorithm

Segmentation algorithm for histopathology breast tissue.

Lung Cancer Segmentation Logo
Lung Cancer Segmentation
 Algorithm

Lung cancer segmentation in H&E stained histopathological images.

Lung cancer risk estimation on thorax CT scans - DSB2017 JulianDaniel Logo
Lung cancer risk estimation on thorax CT scans - DSB2017 JulianDaniel
 Algorithm

Automatic lung cancer risk estimation from thoracic CT scans

Fluid Segmentation in Retinal Optical Coherence Tomography (OCT) Logo
Fluid Segmentation in Retinal Optical Coherence Tomography (OCT)
 Algorithm

Segments intraretinal fluid, subretinal fluid, and pigment epithelial detachments in Optical Coherence Tomography scans. Optimized for Spectralis, Cirrus and Topcon scanners.

HookNet-Lung Logo
HookNet-Lung
 Algorithm

Segmentation algorithm for histopathology lung tissue.

Femur segmentation in CT Logo
Femur segmentation in CT
 Algorithm

Segments the left and right femur in CT images

Neural Image Compression Logo
Neural Image Compression
 Algorithm

Compresses whole slide images into much smaller volumes

CXR Total Lung Volume Measurement Logo
CXR Total Lung Volume Measurement
 Algorithm

Measurement of total lung volume from chest radiographs using frontal and lateral radiographs

Clinically Significant Prostate Cancer Detection in bpMRI Logo
Clinically Significant Prostate Cancer Detection in bpMRI
 Algorithm

Deep learning-based 3D detection/diagnosis model trained, validated and tested using 2732 prostate biparametric MRI exams from two centers.

Demo Vessel Segmentation Logo
Demo Vessel Segmentation
 Algorithm

Demonstrates a vessel segmentation algorithm.

Colon Tissue segmentation Logo
Colon Tissue segmentation
 Algorithm

Tissue segmentation network for colon histopathology images

Body composition Logo
Body composition
 Algorithm

Locates L3 in a CT scan and measures the area of subcutaneous, visceral, and intermuscular adipose tissue and smooth muscle. The average Hounsfield Units of each area are also computed.

Nuclear Pleomorphism Scoring Logo
Nuclear Pleomorphism Scoring
 Algorithm

Scoring nuclear pleomorphism grade in whole-slide breast histopathology images

Hip segmentation in CT Logo
Hip segmentation in CT
 Algorithm

Segments the left and right hip bones in CT images

Vertebral Fracture Assessment Logo
Vertebral Fracture Assessment
 Algorithm

A neural network that assesses vertebral fractures according to the Genant classification

Vertebral Abnormality Scoring Logo
Vertebral Abnormality Scoring
 Algorithm

Score from 0 to 100 that expresses how abnormal the shape of a vertebra is

Lobe-Wise Lung Function Estimation from CT Logo
Lobe-Wise Lung Function Estimation from CT
 Algorithm

Produces patient-level and lobe-level estimates of DLCO and of FEV1 and FVC pre- and post-bronchodilator

STOIC2021 baseline Logo
STOIC2021 baseline
 Algorithm

Example algorithm for the STOIC2021 COVID-19 AI Challenge

Visceral slide on abdominal cine-MRI Logo
Visceral slide on abdominal cine-MRI
 Algorithm

This algorithm calculates the visceral slide along the contour of the abdominal cavity, using segmentation and registration.

Breast Cancer Segmentation and Scoring in H&E Logo
Breast Cancer Segmentation and Scoring in H&E
 Algorithm

Liver segmentation Logo
Liver segmentation
 Algorithm

Segments the liver and liver tumors using nnUNet

Multi-view scaphoid fracture detection Logo
Multi-view scaphoid fracture detection
 Algorithm

Automated scaphoid fracture detection on conventional radiographs of the hand, wrist, and scaphoid in any view.

Lung nodule detection for routine clinical CT scans Logo
Lung nodule detection for routine clinical CT scans
 Algorithm

Deep learning for the detection of pulmonary nodules in chest CT scans

AIROGS Baseline Logo
AIROGS Baseline
 Algorithm

A baseline algorithm for the AIROGS challenge

Clinically Significant Prostate Cancer Detection in bpMRI using models trained with Report Guided Annotations Logo
Clinically Significant Prostate Cancer Detection in bpMRI using models trained with Report Guided Annotations
 Algorithm

Airway Anatomical Labeling Logo
Airway Anatomical Labeling
 Algorithm

Given an airway segmentation where individual airway branches are extracted, this algorithm will automatically find 18 segmental branches, including 8 from the left lung (LB1+2, LB3, LB4, LB5, LB6, LB7+8, LB9, and LB10) and 10 from the right lung (RB1-10).

Prostate Segmentation Logo
Prostate Segmentation
 Algorithm

Whole-Gland Prostate Segmentation in bpMRI

Tiger Algorithm Example Logo
Tiger Algorithm Example
 Algorithm

example on how to create an algorithm for the tiger challenge

Age-related macular degeneration (AMD) Staging in Optical Coherence Tomography (OCT) with UBIX for Increased Reliability Logo
Age-related macular degeneration (AMD) Staging in Optical Coherence Tomography (OCT) with UBIX for Increased Reliability
 Algorithm

Deep learning models for optical coherence tomography (OCT) classification often perform well on data from scanners that were also used during training. However, when these models are applied to data from different vendors, their performance tends to drop substantially. Artifacts that only occur within scans from specific scanners are major causes of this poor generalizability. We aimed to improve this generalizability of deep learning models for OCT classifi- cation. To reduce the effect of vendor-specific artifacts, we propose Uncertainty-Based Instance eXclusion (UBIX), of which we define a hard and a soft variant. UBIX aims to suppress the contributions of B-scans with unseen artifacts to the final OCT-level outputs. Suppression is based on out-of-distribution detection of B-scans, which are instances in our multiple instance learning approach.

Breast and fibroglandular tissue segmentation Logo
Breast and fibroglandular tissue segmentation
 Algorithm

PI-CAI: Baseline nnU-Net (supervised) Logo
PI-CAI: Baseline nnU-Net (supervised)
 Algorithm

Baseline algorithm submission for PI-CAI based on the nnU-Net framework

Wrist segmentation Logo
Wrist segmentation
 Algorithm

Segments the carpal bones and radius and ulna in (dynamic) CT scans of the wrist.

Tibia segmentation in CT Logo
Tibia segmentation in CT
 Algorithm

Segments the left and right tibia in CT images

Rib segmentation Logo
Rib segmentation
 Algorithm

Segments and labels the ribs in CT images

PI-CAI: Baseline nnDetection (supervised) Logo
PI-CAI: Baseline nnDetection (supervised)
 Algorithm

Baseline algorithm submission for PI-CAI based on the nnDetection framework

PI-CAI: Baseline nnU-Net (semi-supervised) Logo
PI-CAI: Baseline nnU-Net (semi-supervised)
 Algorithm

Baseline semi-supervised algorithm submission for PI-CAI based on the nnU-Net framework

PI-CAI: Baseline U-Net (semi-supervised) Logo
PI-CAI: Baseline U-Net (semi-supervised)
 Algorithm

PI-CAI: Baseline nnDetection (semi-supervised) Logo
PI-CAI: Baseline nnDetection (semi-supervised)
 Algorithm

Baseline semi-supervised algorithm submission for PI-CAI based on the nnDetection framework

Endometrial Carcinoma classification Logo
Endometrial Carcinoma classification
 Algorithm

CLAM model that computes the probability of the WSI being (pre)malignant and also outputs an interpretable heatmap.

Colon Budding in IHC Logo
Colon Budding in IHC
 Algorithm

Automatic tumor bud detection in IHC stained slides of CRC

PI-CAI: Baseline nnU-Net (supervised) trained on PI-CAI: Private and Public Training Dataset Logo
PI-CAI: Baseline nnU-Net (supervised) trained on PI-CAI: Private and Public Training Dataset
 Algorithm

Lymphocytes detection in immunohistochemistry Logo
Lymphocytes detection in immunohistochemistry
 Algorithm

JawFracNet Logo
JawFracNet
 Algorithm

Segment mandible and mandibular fractures in head CBCT scan

Deep learning to estimate pulmonary nodule malignancy risk using a current and a prior CT image Logo
Deep learning to estimate pulmonary nodule malignancy risk using a current and a prior CT image
 Algorithm

Deep learning to estimate pulmonary nodule malignancy risk using a prior CT image

PI-CAI: Baseline nnU-Net (semi-supervised) trained on PI-CAI: Private and Public Training Dataset Logo
PI-CAI: Baseline nnU-Net (semi-supervised) trained on PI-CAI: Private and Public Training Dataset
 Algorithm

HookNet-TLS Logo
HookNet-TLS
 Algorithm

A model for detection of TLS and GC in histopathology.

PI-CAI: Baseline nnDetection (semi-supervised) trained on PI-CAI: Private and Public Training Dataset Logo
PI-CAI: Baseline nnDetection (semi-supervised) trained on PI-CAI: Private and Public Training Dataset
 Algorithm

PI-CAI: Baseline U-Net (supervised) trained on PI-CAI: Private and Public Training Dataset Logo
PI-CAI: Baseline U-Net (supervised) trained on PI-CAI: Private and Public Training Dataset
 Algorithm

PI-CAI: Baseline U-Net (semi-supervised) trained on PI-CAI: Private and Public Training Dataset Logo
PI-CAI: Baseline U-Net (semi-supervised) trained on PI-CAI: Private and Public Training Dataset
 Algorithm

PI-CAI: Baseline nnDetection (supervised) trained on PI-CAI Private and Public Training Dataset Logo
PI-CAI: Baseline nnDetection (supervised) trained on PI-CAI Private and Public Training Dataset
 Algorithm

PI-CAI: Baseline nnDetection (supervised) trained on PI-CAI Private and Public Training Dataset

SPIDER Baseline nnU-Net Logo
SPIDER Baseline nnU-Net
 Algorithm

Carpal instability measurements Logo
Carpal instability measurements
 Algorithm

Automated AI pipeline for conducting carpal instability measurements on conventional radiographs of the hand and wrist.

SPIDER Baseline IIS Logo
SPIDER Baseline IIS
 Algorithm

Tumor proportion score in non-small cell lung cancer Logo
Tumor proportion score in non-small cell lung cancer
 Algorithm

Automatic quantification of the tumor proportion score in NSCLC histology

Nuclei detection in immunohistochemistry Logo
Nuclei detection in immunohistochemistry
 Algorithm

Automatic detection of nuclei (hematoxylin positive) in immunohistochemistry WSIs

Neural ODEs for Segmentation of Colon Glands Logo
Neural ODEs for Segmentation of Colon Glands
 Algorithm

Neural Ordinary Differential Equations for Semantic Segmentation of Individual Colon Glands

PDAC Tumor Segmentation Logo
PDAC Tumor Segmentation
 Algorithm

This algorithm takes an HE histology images of the pancreas, segments the tissue, segments the epithelium and segments the tumor (if present)

Universal Lesion Segmentation [ULS23 Baseline] Logo
Universal Lesion Segmentation [ULS23 Baseline]
 Algorithm

Univeral Lesion Segmentation algorithm for Computed Tomography